GitHub - kullrich/dagchainer: Fork of the DAGchainer project …
DAGchainer identifies chains of gene pairs sharing conserved order between genomic regions, by identifying paths through a directed acyclic graph (DAG). Original Project Admins: Joshua Orvis
DAGchainer: Computing Chains of Syntenic Genes in Complete …
Nov 27, 2006 · The DAGchainer software computes chains of syntenic genes found within complete genome sequences. As input, DAGchainer accepts a list of gene pairs with sequence homology along with their genome coordinates.
DAGchainer: a tool for mining segmental genome duplications
Dec 12, 2004 · Given the positions of protein-coding genes along genomic sequence and probability values for protein alignments between genes, DAGchainer identifies chains of gene pairs sharing conserved order between genomic regions, by identifying paths through a directed acyclic graph (DAG).
DAGchainer: a tool for mining segmental genome ... - Oxford …
Jul 9, 2004 · Summary: Given the positions of protein-coding genes along genomic sequence and probability values for protein alignments between genes, DAGchainer identifies chains of gene pairs sharing conserved order between genomic regions, by identifying paths through a directed acyclic graph (DAG).
Package Recipe 'dagchainer' — Bioconda documentation
DAGchainer identifies chains of gene pairs sharing conserved order between genomic regions, by identifying paths through a directed acyclic graph (DAG). You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).
DAGchainer: a tool for mining segmental genome duplications …
Dec 12, 2004 · Summary: Given the positions of protein-coding genes along genomic sequence and probability values for protein alignments between genes, DAGchainer identifies chains of gene pairs sharing conserved order between genomic regions, by identifying paths through a directed acyclic graph (DAG).
DAGchainer: a tool for mining segmental genome ... - Semantic …
Dec 12, 2004 · DAGchainer identifies chains of gene pairs sharing conserved order between genomic regions, by identifying paths through a directed acyclic graph (DAG), which can represent segmentally duplicated regions and genes within a single genome or syntenic regions between related genomes.
DAGchainer download | SourceForge.net
Mar 5, 2013 · Download DAGchainer for free. DAGchainer identifies chains of gene pairs sharing conserved order between genomic regions, by identifying paths through a directed acyclic graph (DAG).
dagchainer - Zenodo
Nov 14, 2020 · DAGchainer identifies chains of gene pairs sharing conserved order between genomic regions, by identifying paths through a directed acyclic graph (DAG). Original Project Admins: Joshua Orvis
DAGchainer - Bitnos
Oct 26, 2010 · The DAGchainer software computes chains of syntenic genes found within complete genome sequences. As input, DAGchainer accepts a list of gene pairs with sequence homology along with their genome coordinates.
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